STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFL86271.1Hypothetical protein. (67 aa)    
Predicted Functional Partners:
SFM09277.1
Uncharacterized protein YtpQ, UPF0354 family; Belongs to the UPF0354 family.
  
     0.740
SFL74182.1
Two-component signal transduction system YycFG, regulatory protein YycI.
  
     0.716
SFM09450.1
Hypothetical protein.
  
     0.710
SFL85323.1
Uncharacterized membrane protein YpjA.
  
     0.695
SFL82420.1
Competence protein ComGD.
  
     0.694
SFM32253.1
Flagellar FliJ protein.
  
     0.693
SFL36273.1
Enterochelin esterase.
  
     0.673
SFL82664.1
Hypothetical protein.
  
     0.669
SFL40015.1
Hypothetical protein.
  
     0.666
secD
SecD/SecF fusion protein; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA; Belongs to the SecD/SecF family. SecD subfamily.
  
     0.652
Your Current Organism:
Gracilibacillus orientalis
NCBI taxonomy Id: 334253
Other names: AS 1.4250, CCM 7326, CECT 7097, G. orientalis, Gracilibacillus orientalis Carrasco et al. 2006, Gracilibacillus sp. EJ-15, Gracilibacillus sp. XH-62, Gracilibacillus sp. XH-63, strain XH-63
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.