STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFL80564.1Fluoroquinolone transport system ATP-binding protein. (284 aa)    
Predicted Functional Partners:
SFL80551.1
Fluoroquinolone transport system permease protein.
 
 
  0.968
SFL80530.1
Fluoroquinolone transport system permease protein.
 
 
  0.962
SFL80587.1
Transcriptional regulator, TetR family.
 
     0.904
SFL71868.1
Polar amino acid transport system permease protein.
   
  0.596
SFL55936.1
iron(III) transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
  
 
0.586
SFL91203.1
Iron complex transport system ATP-binding protein.
 
     
0.582
SFL95646.1
ABC-2 type transport system permease protein.
  
 0.570
SFL60108.1
ABC-2 type transport system permease protein.
  
  0.526
SFM12273.1
ABC-2 family transporter protein.
  
  0.496
SFM33820.1
ABC-2 type transport system permease protein.
 
 
  0.478
Your Current Organism:
Gracilibacillus orientalis
NCBI taxonomy Id: 334253
Other names: AS 1.4250, CCM 7326, CECT 7097, G. orientalis, Gracilibacillus orientalis Carrasco et al. 2006, Gracilibacillus sp. EJ-15, Gracilibacillus sp. XH-62, Gracilibacillus sp. XH-63, strain XH-63
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