Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFL71366.1 | SFM06925.1 | SAMN04487943_103238 | SAMN04487943_107103 | Serine/threonine protein kinase and signal transduction histidine kinase with GAF sensor. | Cxxc_20_cxxc protein. | 0.400 |
SFM06906.1 | SFM06925.1 | SAMN04487943_107102 | SAMN04487943_107103 | Hypothetical protein. | Cxxc_20_cxxc protein. | 0.639 |
SFM06906.1 | SFM06942.1 | SAMN04487943_107102 | SAMN04487943_107104 | Hypothetical protein. | Ribosomal protein S18 acetylase RimI. | 0.503 |
SFM06925.1 | SFL71366.1 | SAMN04487943_107103 | SAMN04487943_103238 | Cxxc_20_cxxc protein. | Serine/threonine protein kinase and signal transduction histidine kinase with GAF sensor. | 0.400 |
SFM06925.1 | SFM06906.1 | SAMN04487943_107103 | SAMN04487943_107102 | Cxxc_20_cxxc protein. | Hypothetical protein. | 0.639 |
SFM06925.1 | SFM06942.1 | SAMN04487943_107103 | SAMN04487943_107104 | Cxxc_20_cxxc protein. | Ribosomal protein S18 acetylase RimI. | 0.601 |
SFM06925.1 | SFM06960.1 | SAMN04487943_107103 | SAMN04487943_107105 | Cxxc_20_cxxc protein. | Hypothetical protein. | 0.423 |
SFM06942.1 | SFM06906.1 | SAMN04487943_107104 | SAMN04487943_107102 | Ribosomal protein S18 acetylase RimI. | Hypothetical protein. | 0.503 |
SFM06942.1 | SFM06925.1 | SAMN04487943_107104 | SAMN04487943_107103 | Ribosomal protein S18 acetylase RimI. | Cxxc_20_cxxc protein. | 0.601 |
SFM06942.1 | SFM06960.1 | SAMN04487943_107104 | SAMN04487943_107105 | Ribosomal protein S18 acetylase RimI. | Hypothetical protein. | 0.529 |
SFM06960.1 | SFM06925.1 | SAMN04487943_107105 | SAMN04487943_107103 | Hypothetical protein. | Cxxc_20_cxxc protein. | 0.423 |
SFM06960.1 | SFM06942.1 | SAMN04487943_107105 | SAMN04487943_107104 | Hypothetical protein. | Ribosomal protein S18 acetylase RimI. | 0.529 |