STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFM06613.1UDP-4-amino-4, 6-dideoxy-N-acetyl-beta-L-altrosamine transaminase; Belongs to the DegT/DnrJ/EryC1 family. (400 aa)    
Predicted Functional Partners:
SFM06720.1
Polysaccharide biosynthesis protein.
 
 0.958
SFM23617.1
UDP-N-acetylglucosamine 4,6-dehydratase.
 
 0.955
SFM06571.1
UDP-2,4-diacetamido-2,4, 6-trideoxy-beta-L-altropyranose hydrolase.
 
  
 0.945
SFM06554.1
UDP-4-amino-4, 6-dideoxy-N-acetyl-beta-L-altrosamine N-acetyltransferase.
 
 
  0.936
SFM06534.1
N-acetylneuraminate synthase.
 
  
 0.928
SFM06592.1
Spore coat polysaccharide biosynthesis protein SpsF.
 
   
 0.912
SFM06633.1
Nucleoside-diphosphate-sugar epimerase.
 
 0.900
SFM23559.1
Spore coat polysaccharide biosynthesis protein SpsG, predicted glycosyltransferase.
 
 
 0.846
SFM26004.1
NDP-sugar epimerase, includes UDP-GlcNAc-inverting 4,6-dehydratase FlaA1 and capsular polysaccharide biosynthesis protein EpsC.
 
 0.834
SFM25751.1
dTDP-glucose 4,6-dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
 
 
 0.756
Your Current Organism:
Gracilibacillus orientalis
NCBI taxonomy Id: 334253
Other names: AS 1.4250, CCM 7326, CECT 7097, G. orientalis, Gracilibacillus orientalis Carrasco et al. 2006, Gracilibacillus sp. EJ-15, Gracilibacillus sp. XH-62, Gracilibacillus sp. XH-63, strain XH-63
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