STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFM18856.1Putative aldouronate transport system permease protein. (316 aa)    
Predicted Functional Partners:
SFM18835.1
Putative aldouronate transport system permease protein.
 
  0.994
SFM18880.1
Putative aldouronate transport system substrate-binding protein.
 
  
  0.914
SFL42300.1
Putative aldouronate transport system permease protein.
  
  0.852
SFL51798.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
  
  0.852
SFL69268.1
Putative aldouronate transport system permease protein.
  
  0.852
SFL93255.1
Putative aldouronate transport system permease protein.
  
  0.852
SFL93979.1
Putative aldouronate transport system permease protein.
  
  0.852
SFM08710.1
Putative aldouronate transport system permease protein.
  
  0.852
SFL46363.1
Putative aldouronate transport system permease protein.
  
  0.851
SFL53700.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
  
  0.851
Your Current Organism:
Gracilibacillus orientalis
NCBI taxonomy Id: 334253
Other names: AS 1.4250, CCM 7326, CECT 7097, G. orientalis, Gracilibacillus orientalis Carrasco et al. 2006, Gracilibacillus sp. EJ-15, Gracilibacillus sp. XH-62, Gracilibacillus sp. XH-63, strain XH-63
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