STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFM17506.1YwhD family protein. (170 aa)    
Predicted Functional Partners:
SFM35993.1
Cell fate regulator YmcA, YheA/YmcA/DUF963 family (controls sporulation, competence, biofilm development); Belongs to the UPF0342 family.
  
    0.759
SFM38601.1
Uncharacterized conserved protein YutE, UPF0331/DUF86 family.
  
     0.701
SFM09277.1
Uncharacterized protein YtpQ, UPF0354 family; Belongs to the UPF0354 family.
  
     0.675
SFM48378.1
8-oxo-dGTP diphosphatase; Belongs to the Nudix hydrolase family.
  
     0.659
SFM00655.1
Uncharacterized protein YlaN, UPF0358 family; Belongs to the UPF0358 family.
  
     0.630
SFM45211.1
Protein of unknown function.
  
     0.626
SFM22331.1
Protein of unknown function.
  
     0.621
SFL85323.1
Uncharacterized membrane protein YpjA.
  
     0.614
bshC
Bacillithiol biosynthesis cysteine-adding enzyme BshC; Involved in bacillithiol (BSH) biosynthesis. May catalyze the last step of the pathway, the addition of cysteine to glucosamine malate (GlcN-Mal) to generate BSH.
  
     0.613
SFM36846.1
Protein of unknown function.
  
     0.613
Your Current Organism:
Gracilibacillus orientalis
NCBI taxonomy Id: 334253
Other names: AS 1.4250, CCM 7326, CECT 7097, G. orientalis, Gracilibacillus orientalis Carrasco et al. 2006, Gracilibacillus sp. EJ-15, Gracilibacillus sp. XH-62, Gracilibacillus sp. XH-63, strain XH-63
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.