STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFM27109.1Putative peptidoglycan binding domain-containing protein. (607 aa)    
Predicted Functional Partners:
SFL85997.1
N-acetylmuramoyl-L-alanine amidase.
 
0.903
SFM29341.1
N-acetylmuramoyl-L-alanine amidase.
 
0.903
SFL79204.1
N-acetylmuramoyl-L-alanine amidase.
 
0.887
SFL91161.1
N-acetylmuramoyl-L-alanine amidase.
 
0.887
SFL39995.1
Penicillin-binding protein 2A.
  
 
 0.824
SFM17491.1
Penicillin-binding protein, 1A family.
  
 
 0.820
SFL85666.1
Penicillin-binding protein 1A.
  
 
 0.816
SFM08972.1
Penicillin-binding protein.
  
 
 0.816
ftsA
Cell division protein FtsA; Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring. Belongs to the FtsA/MreB family.
   
 
 0.795
SFM09133.1
Cell division protein FtsA.
   
 
 0.795
Your Current Organism:
Gracilibacillus orientalis
NCBI taxonomy Id: 334253
Other names: AS 1.4250, CCM 7326, CECT 7097, G. orientalis, Gracilibacillus orientalis Carrasco et al. 2006, Gracilibacillus sp. EJ-15, Gracilibacillus sp. XH-62, Gracilibacillus sp. XH-63, strain XH-63
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