STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFM43744.1Hypothetical protein. (758 aa)    
Predicted Functional Partners:
SFM34600.1
Glycosyl hydrolases family 43.
     0.917
SFM24284.1
LPXTG-motif cell wall anchor domain-containing protein.
     0.790
SFL58878.1
Protein of unknown function.
 
   
 0.773
SFM33746.1
Beta-xylosidase; Belongs to the glycosyl hydrolase 43 family.
 
     0.736
SFL93147.1
alpha-L-fucosidase 2.
  
     0.732
SFL59361.1
Pectate lyase, PelA/Pel-15E family.
  
     0.726
SFM24306.1
LPXTG-motif cell wall anchor domain-containing protein.
 
     0.726
SFL94066.1
alpha-L-fucosidase 2.
 
     0.723
SFL59740.1
Hypothetical protein.
  
     0.720
SFL67842.1
alpha-N-arabinofuranosidase.
 
     0.719
Your Current Organism:
Gracilibacillus orientalis
NCBI taxonomy Id: 334253
Other names: AS 1.4250, CCM 7326, CECT 7097, G. orientalis, Gracilibacillus orientalis Carrasco et al. 2006, Gracilibacillus sp. EJ-15, Gracilibacillus sp. XH-62, Gracilibacillus sp. XH-63, strain XH-63
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.