STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFM44841.1cob(I)alamin adenosyltransferase; Belongs to the Cob(I)alamin adenosyltransferase family. (185 aa)    
Predicted Functional Partners:
SFL91203.1
Iron complex transport system ATP-binding protein.
  
 
  0.739
hisC
Histidinol-phosphate aminotransferase; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily.
    
 0.700
SFM48325.1
Iron complex transport system ATP-binding protein.
  
 
  0.689
SFM44862.1
Peroxiredoxin Q/BCP.
       0.611
SFL92442.1
methylmalonyl-CoA epimerase.
  
   
 0.596
SFM44819.1
Fur family transcriptional regulator, peroxide stress response regulator; Belongs to the Fur family.
       0.522
SFM44881.1
Potassium channel LctB.
       0.463
SFL84280.1
Protein of unknown function.
 
     0.462
SFL84301.1
Energy-coupling factor transport system substrate-specific component.
 
     0.450
SFL42717.1
Ribonuclease BN, tRNA processing enzyme.
    
  0.411
Your Current Organism:
Gracilibacillus orientalis
NCBI taxonomy Id: 334253
Other names: AS 1.4250, CCM 7326, CECT 7097, G. orientalis, Gracilibacillus orientalis Carrasco et al. 2006, Gracilibacillus sp. EJ-15, Gracilibacillus sp. XH-62, Gracilibacillus sp. XH-63, strain XH-63
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.