Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SFM01713.1 | SFM51014.1 | SAMN04487943_106207 | SAMN04487943_1255 | Transcriptional regulator, TraR/DksA family. | Protein-arginine kinase activator protein McsA. | 0.505 |
| SFM01713.1 | fapR | SAMN04487943_106207 | SAMN04487943_10615 | Transcriptional regulator, TraR/DksA family. | Acyl-coenzyme A thioesterase PaaI, contains HGG motif; Transcriptional factor involved in regulation of membrane lipid biosynthesis by repressing genes involved in fatty acid and phospholipid metabolism. | 0.421 |
| SFM01713.1 | mcsB | SAMN04487943_106207 | SAMN04487943_1256 | Transcriptional regulator, TraR/DksA family. | Protein arginine kinase; Catalyzes the specific phosphorylation of arginine residues in a large number of proteins. Is part of the bacterial stress response system. Protein arginine phosphorylation has a physiologically important role and is involved in the regulation of many critical cellular processes, such as protein homeostasis, motility, competence, and stringent and stress responses, by regulating gene expression and protein activity. | 0.499 |
| SFM16662.1 | SFM51014.1 | SAMN04487943_10930 | SAMN04487943_1255 | Protein-tyrosine phosphatase; Belongs to the low molecular weight phosphotyrosine protein phosphatase family. | Protein-arginine kinase activator protein McsA. | 0.757 |
| SFM16662.1 | mcsB | SAMN04487943_10930 | SAMN04487943_1256 | Protein-tyrosine phosphatase; Belongs to the low molecular weight phosphotyrosine protein phosphatase family. | Protein arginine kinase; Catalyzes the specific phosphorylation of arginine residues in a large number of proteins. Is part of the bacterial stress response system. Protein arginine phosphorylation has a physiologically important role and is involved in the regulation of many critical cellular processes, such as protein homeostasis, motility, competence, and stringent and stress responses, by regulating gene expression and protein activity. | 0.775 |
| SFM38037.1 | SFM50993.1 | SAMN04487943_1161 | SAMN04487943_1254 | Hypothetical protein. | Transcriptional regulator CtsR; Belongs to the CtsR family. | 0.658 |
| SFM38037.1 | SFM51014.1 | SAMN04487943_1161 | SAMN04487943_1255 | Hypothetical protein. | Protein-arginine kinase activator protein McsA. | 0.571 |
| SFM38037.1 | mcsB | SAMN04487943_1161 | SAMN04487943_1256 | Hypothetical protein. | Protein arginine kinase; Catalyzes the specific phosphorylation of arginine residues in a large number of proteins. Is part of the bacterial stress response system. Protein arginine phosphorylation has a physiologically important role and is involved in the regulation of many critical cellular processes, such as protein homeostasis, motility, competence, and stringent and stress responses, by regulating gene expression and protein activity. | 0.673 |
| SFM45572.1 | SFM50993.1 | SAMN04487943_11940 | SAMN04487943_1254 | ATP-dependent Clp protease ATP-binding subunit ClpE; Belongs to the ClpA/ClpB family. | Transcriptional regulator CtsR; Belongs to the CtsR family. | 0.720 |
| SFM45572.1 | SFM51014.1 | SAMN04487943_11940 | SAMN04487943_1255 | ATP-dependent Clp protease ATP-binding subunit ClpE; Belongs to the ClpA/ClpB family. | Protein-arginine kinase activator protein McsA. | 0.643 |
| SFM45572.1 | mcsB | SAMN04487943_11940 | SAMN04487943_1256 | ATP-dependent Clp protease ATP-binding subunit ClpE; Belongs to the ClpA/ClpB family. | Protein arginine kinase; Catalyzes the specific phosphorylation of arginine residues in a large number of proteins. Is part of the bacterial stress response system. Protein arginine phosphorylation has a physiologically important role and is involved in the regulation of many critical cellular processes, such as protein homeostasis, motility, competence, and stringent and stress responses, by regulating gene expression and protein activity. | 0.726 |
| SFM50978.1 | SFM50993.1 | SAMN04487943_1253 | SAMN04487943_1254 | Putative Mg2+ transporter-C (MgtC) family protein. | Transcriptional regulator CtsR; Belongs to the CtsR family. | 0.561 |
| SFM50978.1 | SFM51014.1 | SAMN04487943_1253 | SAMN04487943_1255 | Putative Mg2+ transporter-C (MgtC) family protein. | Protein-arginine kinase activator protein McsA. | 0.547 |
| SFM50978.1 | SFM51058.1 | SAMN04487943_1253 | SAMN04487943_1257 | Putative Mg2+ transporter-C (MgtC) family protein. | ATP-dependent Clp protease ATP-binding subunit ClpC; Belongs to the ClpA/ClpB family. | 0.522 |
| SFM50978.1 | mcsB | SAMN04487943_1253 | SAMN04487943_1256 | Putative Mg2+ transporter-C (MgtC) family protein. | Protein arginine kinase; Catalyzes the specific phosphorylation of arginine residues in a large number of proteins. Is part of the bacterial stress response system. Protein arginine phosphorylation has a physiologically important role and is involved in the regulation of many critical cellular processes, such as protein homeostasis, motility, competence, and stringent and stress responses, by regulating gene expression and protein activity. | 0.547 |
| SFM50993.1 | SFM38037.1 | SAMN04487943_1254 | SAMN04487943_1161 | Transcriptional regulator CtsR; Belongs to the CtsR family. | Hypothetical protein. | 0.658 |
| SFM50993.1 | SFM45572.1 | SAMN04487943_1254 | SAMN04487943_11940 | Transcriptional regulator CtsR; Belongs to the CtsR family. | ATP-dependent Clp protease ATP-binding subunit ClpE; Belongs to the ClpA/ClpB family. | 0.720 |
| SFM50993.1 | SFM50978.1 | SAMN04487943_1254 | SAMN04487943_1253 | Transcriptional regulator CtsR; Belongs to the CtsR family. | Putative Mg2+ transporter-C (MgtC) family protein. | 0.561 |
| SFM50993.1 | SFM51014.1 | SAMN04487943_1254 | SAMN04487943_1255 | Transcriptional regulator CtsR; Belongs to the CtsR family. | Protein-arginine kinase activator protein McsA. | 0.977 |
| SFM50993.1 | SFM51058.1 | SAMN04487943_1254 | SAMN04487943_1257 | Transcriptional regulator CtsR; Belongs to the CtsR family. | ATP-dependent Clp protease ATP-binding subunit ClpC; Belongs to the ClpA/ClpB family. | 0.926 |
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