Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
FMG_0048Conserved hypothetical protein. (2427 aa)    
Predicted Functional Partners:
FMG_0049
Putative N-acetylmuramoyl-L-alanine amidase.
     
0.895
FMG_0635
Hypothetical protein.
  
 
 0.828
FMG_1055
ABC transporter ATP-binding protein.
  
 
 0.828
FMG_1053
ABC transporter permease protein.
  
 
 0.534
FMG_0035
Cell wall-associated serine proteinase precursor; Belongs to the peptidase S8 family.
  
  
 0.517
FMG_0010
Glutamine ABC transporter ATP-binding protein.
  
  
 0.501
FMG_0399
Copper-transporting P-type ATPase.
  
  
 0.495
FMG_0051
Putative biotin operon repressor.
  
    0.482
FMG_0050
Oxygen-independent coproporphyrinogen III oxidase; Fe-S oxidoreductase.
       0.477
FMG_1112
Amino acid ABC transporter permease protein.
     
 0.441
Your Current Organism:
Finegoldia magna ATCC 29328
NCBI taxonomy Id: 334413
Other names: F. magna ATCC 29328, Finegoldia magna str. ATCC 29328, Finegoldia magna strain ATCC 29328
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