Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
FMG_0035 | FMG_0186 | Cell wall-associated serine proteinase precursor; Belongs to the peptidase S8 family. | Hypothetical protein. | 0.479 |
FMG_0035 | FMG_0187 | Cell wall-associated serine proteinase precursor; Belongs to the peptidase S8 family. | Cell wall surface anchor family protein. | 0.479 |
FMG_0035 | FMG_0188 | Cell wall-associated serine proteinase precursor; Belongs to the peptidase S8 family. | Putative cell wall surface anchor family protein. | 0.479 |
FMG_0035 | FMG_0189 | Cell wall-associated serine proteinase precursor; Belongs to the peptidase S8 family. | Sortase family protein. | 0.535 |
FMG_0035 | FMG_0190 | Cell wall-associated serine proteinase precursor; Belongs to the peptidase S8 family. | Sortase family protein. | 0.533 |
FMG_0035 | FMG_0191 | Cell wall-associated serine proteinase precursor; Belongs to the peptidase S8 family. | Sortase family protein. | 0.549 |
FMG_0035 | FMG_0229 | Cell wall-associated serine proteinase precursor; Belongs to the peptidase S8 family. | Putative surface protein precursor. | 0.871 |
FMG_0186 | FMG_0035 | Hypothetical protein. | Cell wall-associated serine proteinase precursor; Belongs to the peptidase S8 family. | 0.479 |
FMG_0186 | FMG_0187 | Hypothetical protein. | Cell wall surface anchor family protein. | 0.844 |
FMG_0186 | FMG_0188 | Hypothetical protein. | Putative cell wall surface anchor family protein. | 0.650 |
FMG_0186 | FMG_0189 | Hypothetical protein. | Sortase family protein. | 0.462 |
FMG_0186 | FMG_0190 | Hypothetical protein. | Sortase family protein. | 0.472 |
FMG_0186 | FMG_0191 | Hypothetical protein. | Sortase family protein. | 0.479 |
FMG_0186 | FMG_0229 | Hypothetical protein. | Putative surface protein precursor. | 0.735 |
FMG_0187 | FMG_0035 | Cell wall surface anchor family protein. | Cell wall-associated serine proteinase precursor; Belongs to the peptidase S8 family. | 0.479 |
FMG_0187 | FMG_0186 | Cell wall surface anchor family protein. | Hypothetical protein. | 0.844 |
FMG_0187 | FMG_0188 | Cell wall surface anchor family protein. | Putative cell wall surface anchor family protein. | 0.849 |
FMG_0187 | FMG_0189 | Cell wall surface anchor family protein. | Sortase family protein. | 0.876 |
FMG_0187 | FMG_0190 | Cell wall surface anchor family protein. | Sortase family protein. | 0.878 |
FMG_0187 | FMG_0191 | Cell wall surface anchor family protein. | Sortase family protein. | 0.795 |
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