Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
FMG_0190Sortase family protein. (279 aa)    
Predicted Functional Partners:
FMG_0188
Putative cell wall surface anchor family protein.
 
   
 0.937
FMG_0187
Cell wall surface anchor family protein.
 
   
 0.928
FMG_0191
Sortase family protein.
 
    
0.834
FMG_0189
Sortase family protein.
 
   
0.823
FMG_0152
Na+driven multidrug efflux pump.
   
  
 0.619
FMG_0207
Na+driven multidrug efflux pump.
   
  
 0.619
FMG_0935
Na+driven multidrug efflux pump.
   
  
 0.619
FMG_1413
Na+driven multidrug efflux pump.
   
  
 0.619
FMG_1457
Na+driven multidrug efflux pump.
   
  
 0.619
FMG_0035
Cell wall-associated serine proteinase precursor; Belongs to the peptidase S8 family.
 
  
 0.594
Your Current Organism:
Finegoldia magna ATCC 29328
NCBI taxonomy Id: 334413
Other names: F. magna ATCC 29328, Finegoldia magna str. ATCC 29328, Finegoldia magna strain ATCC 29328
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