STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FMG_0211Putative amino acid transporter. (456 aa)    
Predicted Functional Partners:
FMG_0394
Alpha-amylase.
   
 0.980
FMG_0210
Putative glutamine amidotransferase.
 
    0.847
FMG_0209
Conserved hypothetical protein; Belongs to the UPF0597 family.
       0.750
aroK
Shikimate 5-dehydrogenase; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate dehydrogenase family.
   
 
 0.504
FMG_1112
Amino acid ABC transporter permease protein.
 
  
 0.495
purD
Phosphoribosylformylglycinamidine synthase; Belongs to the GARS family.
  
  
 0.448
FMG_0207
Na+driven multidrug efflux pump.
   
 
 0.437
FMG_0035
Cell wall-associated serine proteinase precursor; Belongs to the peptidase S8 family.
  
 
 0.425
FMG_0208
Conserved hypothetical protein.
       0.418
Your Current Organism:
Finegoldia magna ATCC 29328
NCBI taxonomy Id: 334413
Other names: F. magna ATCC 29328, Finegoldia magna str. ATCC 29328, Finegoldia magna strain ATCC 29328
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