Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
FMG_0214Putative aminotransferase. (387 aa)    
Predicted Functional Partners:
FMG_0215
Coenzyme F390 synthetase.
 
    0.816
FMG_0216
Pyruvate/ferredoxin oxidoreductase beta subunit.
  
  
 0.779
FMG_0217
Pyruvate/ferredoxin oxidoreductase alpha subunit.
  
    0.777
thrB
Threonine synthase; Catalyzes the ATP-dependent phosphorylation of L-homoserine to L-homoserine phosphate.
  
 
 0.580
FMG_0385
Pyruvate/ferredoxin oxidoreductase.
  
  
 0.452
purD
Phosphoribosylformylglycinamidine synthase; Belongs to the GARS family.
  
 
 0.436
FMG_0218
Pyruvate/ferredoxin oxidoreductase gamma subunit.
  
  
 0.424
aroK
Shikimate 5-dehydrogenase; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate dehydrogenase family.
  
  
 0.419
Your Current Organism:
Finegoldia magna ATCC 29328
NCBI taxonomy Id: 334413
Other names: F. magna ATCC 29328, Finegoldia magna str. ATCC 29328, Finegoldia magna strain ATCC 29328
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.