STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FMG_0232Putative dimethylamine corrinoid protein. (217 aa)    
Predicted Functional Partners:
FMG_0231
Putative methylcobalamin-coenzyme M methyltransferase; Belongs to the uroporphyrinogen decarboxylase family.
 
 
 0.995
FMG_0233
Conserved hypothetical protein.
 
    0.898
FMG_0230
Putative cobalamin synthesis related protein.
 
  
 0.897
deoC
Deoxyribose-phosphate aldolase; Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate; Belongs to the DeoC/FbaB aldolase family. DeoC type 1 subfamily.
   
 
 0.868
FMG_0312
Putative metyhltransferase; Belongs to the uroporphyrinogen decarboxylase family.
 
  
 0.839
FMG_0234
Conserved hypothetical protein.
       0.486
FMG_0235
Conserved hypothetical protein.
       0.486
FMG_0590
Two-component sensor histidine kinase.
     
 0.406
Your Current Organism:
Finegoldia magna ATCC 29328
NCBI taxonomy Id: 334413
Other names: F. magna ATCC 29328, Finegoldia magna str. ATCC 29328, Finegoldia magna strain ATCC 29328
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