STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FMG_0239Antibiotic ABC transporter ATP-binding protein. (348 aa)    
Predicted Functional Partners:
FMG_0240
Antibiotic ABC transporter permease protein.
  
 0.970
FMG_0241
Putative ABC transporter.
 
  
 0.966
FMG_0271
Oligopeptide ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily.
     
0.900
FMG_1248
Oligopeptide ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily.
     
0.897
FMG_0238
Branched-chain amino acid transporter; Component of the transport system for branched-chain amino acids.
       0.671
FMG_0495
Conserved hypothetical protein.
  
 
 0.641
FMG_1277
Transcriptional regulator GntR family.
  
  
 0.551
FMG_1053
ABC transporter permease protein.
 
      0.526
FMG_1267
Macrolide ABC transporter ATP-binding protein.
  
  0.443
FMG_0650
Molybdate ABC transporter permease protein; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.
      0.417
Your Current Organism:
Finegoldia magna ATCC 29328
NCBI taxonomy Id: 334413
Other names: F. magna ATCC 29328, Finegoldia magna str. ATCC 29328, Finegoldia magna strain ATCC 29328
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