Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
FMG_0251Putative pilin biogenesis protein. (363 aa)    
Predicted Functional Partners:
FMG_0250
Putative ATPases involved in pili biogenesis.
 
 0.997
FMG_0555
Type IV pilin PilA homolog.
 
  
 0.949
FMG_0711
Late competence protein; DNA binding and uptake.
  
  
 0.826
FMG_0788
Putative integral membrane protein.
 
  
 0.821
FMG_1140
Phage-related single-strand DNA-binding protein.
  
    0.696
FMG_0965
Hypothetical protein.
  
    0.646
FMG_0249
Conserved hypothetical protein.
       0.499
cinA
Competence-damage inducible protein; Belongs to the CinA family.
     
 0.445
FMG_0797
Putative Smf protein DNA processing subunit A.
  
  
 0.437
FMG_1498
Putative amidophosphoribosyltransferases.
  
  
 0.419
Your Current Organism:
Finegoldia magna ATCC 29328
NCBI taxonomy Id: 334413
Other names: F. magna ATCC 29328, Finegoldia magna str. ATCC 29328, Finegoldia magna strain ATCC 29328
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