Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
FMG_0007 | FMG_0009 | FMG_0007 | FMG_0009 | Anti-sigma B factor antagonist; Belongs to the anti-sigma-factor antagonist family. | RNA polymerase sigma B factor; Belongs to the sigma-70 factor family. | 0.989 |
FMG_0007 | FMG_0063 | FMG_0007 | FMG_0063 | Anti-sigma B factor antagonist; Belongs to the anti-sigma-factor antagonist family. | Thiamine biosynthesis protein. | 0.824 |
FMG_0007 | FMG_0281 | FMG_0007 | FMG_0281 | Anti-sigma B factor antagonist; Belongs to the anti-sigma-factor antagonist family. | Putative sigma factor SigB regulation protein. | 0.969 |
FMG_0007 | FMG_1009 | FMG_0007 | FMG_1009 | Anti-sigma B factor antagonist; Belongs to the anti-sigma-factor antagonist family. | Hypothetical protein. | 0.941 |
FMG_0007 | FMG_1043 | FMG_0007 | FMG_1043 | Anti-sigma B factor antagonist; Belongs to the anti-sigma-factor antagonist family. | Conserved hypothetical protein. | 0.992 |
FMG_0007 | FMG_1535 | FMG_0007 | FMG_1535 | Anti-sigma B factor antagonist; Belongs to the anti-sigma-factor antagonist family. | Hypothetical protein. | 0.941 |
FMG_0009 | FMG_0007 | FMG_0009 | FMG_0007 | RNA polymerase sigma B factor; Belongs to the sigma-70 factor family. | Anti-sigma B factor antagonist; Belongs to the anti-sigma-factor antagonist family. | 0.989 |
FMG_0009 | FMG_0281 | FMG_0009 | FMG_0281 | RNA polymerase sigma B factor; Belongs to the sigma-70 factor family. | Putative sigma factor SigB regulation protein. | 0.778 |
FMG_0009 | FMG_1009 | FMG_0009 | FMG_1009 | RNA polymerase sigma B factor; Belongs to the sigma-70 factor family. | Hypothetical protein. | 0.620 |
FMG_0009 | FMG_1043 | FMG_0009 | FMG_1043 | RNA polymerase sigma B factor; Belongs to the sigma-70 factor family. | Conserved hypothetical protein. | 0.753 |
FMG_0009 | FMG_1535 | FMG_0009 | FMG_1535 | RNA polymerase sigma B factor; Belongs to the sigma-70 factor family. | Hypothetical protein. | 0.620 |
FMG_0063 | FMG_0007 | FMG_0063 | FMG_0007 | Thiamine biosynthesis protein. | Anti-sigma B factor antagonist; Belongs to the anti-sigma-factor antagonist family. | 0.824 |
FMG_0063 | FMG_0281 | FMG_0063 | FMG_0281 | Thiamine biosynthesis protein. | Putative sigma factor SigB regulation protein. | 0.822 |
FMG_0063 | FMG_1009 | FMG_0063 | FMG_1009 | Thiamine biosynthesis protein. | Hypothetical protein. | 0.681 |
FMG_0063 | FMG_1043 | FMG_0063 | FMG_1043 | Thiamine biosynthesis protein. | Conserved hypothetical protein. | 0.681 |
FMG_0063 | FMG_1535 | FMG_0063 | FMG_1535 | Thiamine biosynthesis protein. | Hypothetical protein. | 0.681 |
FMG_0280 | FMG_0281 | FMG_0280 | FMG_0281 | Methyltransferase. | Putative sigma factor SigB regulation protein. | 0.819 |
FMG_0280 | FMG_0283 | FMG_0280 | FMG_0283 | Methyltransferase. | Conserved hypothetical protein. | 0.741 |
FMG_0280 | FMG_0284 | FMG_0280 | FMG_0284 | Methyltransferase. | Conserved hypothetical protein. | 0.701 |
FMG_0280 | pgi | FMG_0280 | FMG_0282 | Methyltransferase. | Glucose-6-phosphate isomerase; Belongs to the GPI family. | 0.771 |
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