Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
FMG_0286Conserved hypothetical protein. (326 aa)    
Predicted Functional Partners:
FMG_0287
rRNA methylase.
 
     0.799
FMG_0288
Phosphoglycolate phosphatase.
       0.773
queH
Conserved hypothetical protein; Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr).
       0.773
FMG_0297
Conserved hypothetical protein.
 
     0.660
FMG_0185
Conserved hypothetical protein.
  
     0.552
FMG_0294
Mutator protein MutT/nudix family.
 
     0.542
FMG_0285
Putative methyltransferase.
       0.540
FMG_0290
Formate dehydrogenase associated protein; Required for formate dehydrogenase (FDH) activity. Belongs to the FdhD family.
       0.498
FMG_0291
Putative formate/nitrite transporter.
       0.498
FMG_0292
Molybdenum cofactor biosynthesis protein; Catalyzes the insertion of molybdate into adenylated molybdopterin with the concomitant release of AMP. Belongs to the MoeA family.
  
    0.494
Your Current Organism:
Finegoldia magna ATCC 29328
NCBI taxonomy Id: 334413
Other names: F. magna ATCC 29328, Finegoldia magna str. ATCC 29328, Finegoldia magna strain ATCC 29328
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