Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
FMG_0304Iron-sulfur binding reductase. (315 aa)    
Predicted Functional Partners:
FMG_0302
Conserved hypothetical protein.
 
     0.937
fumC
Fumarate hydratase; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily.
   
 
 0.908
FMG_0303
Conserved hypothetical protein.
 
     0.896
FMG_0306
Conserved hypothetical protein.
 
     0.850
FMG_0305
Conserved hypothetical protein.
 
     0.825
FMG_0301
Conserved hypothetical protein.
 
   
 0.772
FMG_0237
Conserved hypothetical protein.
 
   
 0.741
FMG_0261
Conserved hypothetical protein.
 
   
 0.727
FMG_1357
Putative membrane spanning protein.
 
   
 0.633
FMG_0793
Glyceraldehyde-3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.
   
  
 0.606
Your Current Organism:
Finegoldia magna ATCC 29328
NCBI taxonomy Id: 334413
Other names: F. magna ATCC 29328, Finegoldia magna str. ATCC 29328, Finegoldia magna strain ATCC 29328
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