Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
FMG_0319Homoserine dehydrogenase. (393 aa)    
Predicted Functional Partners:
thrB
Threonine synthase; Catalyzes the ATP-dependent phosphorylation of L-homoserine to L-homoserine phosphate.
 
 
 0.997
asd
Aspartate-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family.
 
 0.996
FMG_0317
Aspartate kinase; Belongs to the aspartokinase family.
 
 0.993
FMG_1264
Threonine synthase.
 
 
 0.933
FMG_0388
5-methyltetrahydropteroyltriglutamate- homocysteine methyltransferase.
  
 
 0.876
FMG_1138
Branched-chain amino acid aminotransferase.
  
 
 0.859
luxS
Autoinducer-2 production protein; Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5-dihydroxy-2,3-pentadione (DPD). Belongs to the LuxS family.
     
 0.810
FMG_1503
L-serine dehydratase alpha subunit; Belongs to the iron-sulfur dependent L-serine dehydratase family.
   
 
  0.803
FMG_1504
L-serine dehydratase beta subunit; Belongs to the iron-sulfur dependent L-serine dehydratase family.
   
 
  0.803
FMG_1465
Putative aspartate aminotransferase.
    
  0.801
Your Current Organism:
Finegoldia magna ATCC 29328
NCBI taxonomy Id: 334413
Other names: F. magna ATCC 29328, Finegoldia magna str. ATCC 29328, Finegoldia magna strain ATCC 29328
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