Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
FMG_0355Conserved hypothetical protein. (125 aa)    
Predicted Functional Partners:
FMG_0356
Conserved hypothetical protein.
 
    0.984
FMG_0359
Cell-shape determining protein; Involved in formation and maintenance of cell shape.
 
     0.844
FMG_0361
Putative penicillin-binding protein 2.
 
     0.843
FMG_0357
DNA repair protein RadC; Belongs to the UPF0758 family.
       0.814
FMG_0358
Cell-shape determining protein.
       0.812
FMG_0360
Putative cell-shape determining protein.
       0.812
FMG_0363
Ribonucleases G.
       0.808
FMG_0362
Putative cell division inhibitor.
       0.780
FMG_0478
Putative thiamine biosynthesis lipoprotein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein.
 
     0.608
rnfC
Electron transport complex protein; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfC subfamily.
 
     0.567
Your Current Organism:
Finegoldia magna ATCC 29328
NCBI taxonomy Id: 334413
Other names: F. magna ATCC 29328, Finegoldia magna str. ATCC 29328, Finegoldia magna strain ATCC 29328
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