Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
FMG_0360Putative cell-shape determining protein. (163 aa)    
Predicted Functional Partners:
FMG_0359
Cell-shape determining protein; Involved in formation and maintenance of cell shape.
  
 
 0.982
FMG_0362
Putative cell division inhibitor.
  
  
 0.928
FMG_0358
Cell-shape determining protein.
  
  
 0.876
FMG_0361
Putative penicillin-binding protein 2.
  
  
 0.838
FMG_0357
DNA repair protein RadC; Belongs to the UPF0758 family.
  
  
 0.828
FMG_0355
Conserved hypothetical protein.
       0.812
FMG_0356
Conserved hypothetical protein.
       0.812
FMG_0363
Ribonucleases G.
       0.799
rplU
50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.
     
 0.589
FMG_0613
Cell division protein; Penicillin-binding protein 2 homolog.
  
  
 0.508
Your Current Organism:
Finegoldia magna ATCC 29328
NCBI taxonomy Id: 334413
Other names: F. magna ATCC 29328, Finegoldia magna str. ATCC 29328, Finegoldia magna strain ATCC 29328
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