Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
FMG_0387Putative phosphonate ABC transporter substrate-binding protein. (275 aa)    
Predicted Functional Partners:
FMG_0388
5-methyltetrahydropteroyltriglutamate- homocysteine methyltransferase.
 
     0.943
FMG_0386
Putative acyl-CoA dehydrogenase.
 
    0.887
FMG_0389
Hypothetical protein.
       0.803
FMG_1198
Conserved hypothetical protein.
  
     0.564
FMG_1501
Albumin-binding protein like Cwp66.
  
     0.498
FMG_1271
ABC transporter permease protein.
  
     0.479
FMG_0299
Conserved hypothetical protein.
 
     0.441
FMG_0127
Capsular polysaccharide synthesis related protein.
  
     0.426
FMG_0911
Two-component sensor histidine kinase.
 
   
 0.408
Your Current Organism:
Finegoldia magna ATCC 29328
NCBI taxonomy Id: 334413
Other names: F. magna ATCC 29328, Finegoldia magna str. ATCC 29328, Finegoldia magna strain ATCC 29328
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