Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
FMG_0408Conserved hypothetical protein. (430 aa)    
Predicted Functional Partners:
FMG_0409
Capsular polysaccharide biosynthesis protein.
       0.773
FMG_0406
Putative histidinol-phosphatase; Belongs to the PHP hydrolase family. HisK subfamily.
       0.592
FMG_0407
Putative dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
       0.592
FMG_0410
Putative transcriptional regulator.
       0.548
deoD
Purine nucleoside phosphorylase.
       0.480
deoC
Deoxyribose-phosphate aldolase; Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate; Belongs to the DeoC/FbaB aldolase family. DeoC type 1 subfamily.
       0.480
FMG_0403
Hypothetical protein.
       0.474
Your Current Organism:
Finegoldia magna ATCC 29328
NCBI taxonomy Id: 334413
Other names: F. magna ATCC 29328, Finegoldia magna str. ATCC 29328, Finegoldia magna strain ATCC 29328
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