Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
FMG_0448Conserved hypothetical protein; Belongs to the sulfur carrier protein TusA family. (193 aa)    
Predicted Functional Partners:
FMG_0558
Iron-sulfur cofactor synthesis protein.
   
 
 0.823
FMG_1587
Iron-sulfur cofactor synthesis protein.
   
 
 0.823
FMG_0450
Mechanosensitive ion channel family protein.
       0.803
FMG_0451
Conserved hypothetical protein.
       0.803
FMG_0449
Conserved hypothetical protein.
       0.785
selD
Selenophosphate synthetase; Synthesizes selenophosphate from selenide and ATP.
 
   
 0.780
FMG_0446
Chloride channel protein.
  
    0.778
FMG_0445
Hypothetical protein.
       0.773
FMG_0447
Hypothetical protein.
       0.773
FMG_0452
Putative glycosyltransferase.
       0.723
Your Current Organism:
Finegoldia magna ATCC 29328
NCBI taxonomy Id: 334413
Other names: F. magna ATCC 29328, Finegoldia magna str. ATCC 29328, Finegoldia magna strain ATCC 29328
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