Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
FMG_0555Type IV pilin PilA homolog. (134 aa)    
Predicted Functional Partners:
FMG_0251
Putative pilin biogenesis protein.
 
  
 0.949
FMG_0250
Putative ATPases involved in pili biogenesis.
 
  
 0.931
FMG_0711
Late competence protein; DNA binding and uptake.
  
  
 0.823
FMG_0788
Putative integral membrane protein.
   
  
 0.785
FMG_0556
Conserved hypothetical protein.
       0.548
FMG_0557
Hypothetical protein.
       0.548
FMG_0797
Putative Smf protein DNA processing subunit A.
   
  
 0.511
FMG_1140
Phage-related single-strand DNA-binding protein.
   
  
 0.481
FMG_0558
Iron-sulfur cofactor synthesis protein.
       0.402
thiI
Thiamine biosynthesis protein; Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS.
       0.402
Your Current Organism:
Finegoldia magna ATCC 29328
NCBI taxonomy Id: 334413
Other names: F. magna ATCC 29328, Finegoldia magna str. ATCC 29328, Finegoldia magna strain ATCC 29328
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