Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
FMG_0604Putative ATP-dependent exonuclease; ATP-dependent DNA helicase. (967 aa)    
Predicted Functional Partners:
FMG_0603
Putative ATP-dependent exonuclease.
 
 
 0.995
FMG_0601
Putative ribosomal large subunit pseudouridine synthase; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family.
 
     0.825
FMG_0602
Uridine kinase.
       0.775
recD2
ATP-dependent exodeoxyribonuclease alpha subunit; DNA-dependent ATPase and ATP-dependent 5'-3' DNA helicase. Has no activity on blunt DNA or DNA with 3'-overhangs, requires at least 10 bases of 5'-ssDNA for helicase activity; Belongs to the RecD family. RecD-like subfamily.
  
 
 0.676
FMG_0606
Two-component sensor histidine kinase.
  
    0.667
FMG_0605
Two-component response regulator.
       0.665
FMG_0607
Conserved hypothetical protein.
       0.665
FMG_0943
Conserved hypothetical protein; Rlx-like protein.
  
 
 0.581
FMG_0973
Nickase.
  
 
 0.581
FMG_0600
Conserved hypothetical protein.
       0.569
Your Current Organism:
Finegoldia magna ATCC 29328
NCBI taxonomy Id: 334413
Other names: F. magna ATCC 29328, Finegoldia magna str. ATCC 29328, Finegoldia magna strain ATCC 29328
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