Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
FMG_0624 | FMG_0625 | FMG_0624 | FMG_0625 | Putative transcriptional regulator. | Conserved hypothetical protein. | 0.783 |
FMG_0624 | FMG_0627 | FMG_0624 | FMG_0627 | Putative transcriptional regulator. | Conserved hypothetical protein; Belongs to the UPF0297 family. | 0.762 |
FMG_0624 | FMG_0628 | FMG_0624 | FMG_0628 | Putative transcriptional regulator. | Putative endonuclease involved in recombination; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF HJR family. | 0.628 |
FMG_0624 | FMG_0629 | FMG_0624 | FMG_0629 | Putative transcriptional regulator. | Conserved hypothetical protein. | 0.592 |
FMG_0624 | FMG_0630 | FMG_0624 | FMG_0630 | Putative transcriptional regulator. | Transcriptional regulator Fur family; Belongs to the Fur family. | 0.644 |
FMG_0624 | FMG_0632 | FMG_0624 | FMG_0632 | Putative transcriptional regulator. | Conserved hypothetical protein; Belongs to the UPF0342 family. | 0.579 |
FMG_0624 | FMG_0633 | FMG_0624 | FMG_0633 | Putative transcriptional regulator. | caffeoyl-coA O-methyltransferase. | 0.599 |
FMG_0624 | FMG_0634 | FMG_0624 | FMG_0634 | Putative transcriptional regulator. | Collagenase family protease. | 0.528 |
FMG_0624 | alaS | FMG_0624 | FMG_0626 | Putative transcriptional regulator. | alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain. | 0.792 |
FMG_0624 | rnj | FMG_0624 | FMG_0631 | Putative transcriptional regulator. | Putative Zn-dependent hydrolase; An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and/or decay. | 0.622 |
FMG_0625 | FMG_0624 | FMG_0625 | FMG_0624 | Conserved hypothetical protein. | Putative transcriptional regulator. | 0.783 |
FMG_0625 | FMG_0627 | FMG_0625 | FMG_0627 | Conserved hypothetical protein. | Conserved hypothetical protein; Belongs to the UPF0297 family. | 0.744 |
FMG_0625 | FMG_0628 | FMG_0625 | FMG_0628 | Conserved hypothetical protein. | Putative endonuclease involved in recombination; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF HJR family. | 0.595 |
FMG_0625 | FMG_0629 | FMG_0625 | FMG_0629 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.588 |
FMG_0625 | FMG_0630 | FMG_0625 | FMG_0630 | Conserved hypothetical protein. | Transcriptional regulator Fur family; Belongs to the Fur family. | 0.595 |
FMG_0625 | FMG_0632 | FMG_0625 | FMG_0632 | Conserved hypothetical protein. | Conserved hypothetical protein; Belongs to the UPF0342 family. | 0.581 |
FMG_0625 | FMG_0633 | FMG_0625 | FMG_0633 | Conserved hypothetical protein. | caffeoyl-coA O-methyltransferase. | 0.590 |
FMG_0625 | FMG_0634 | FMG_0625 | FMG_0634 | Conserved hypothetical protein. | Collagenase family protease. | 0.486 |
FMG_0625 | alaS | FMG_0625 | FMG_0626 | Conserved hypothetical protein. | alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain. | 0.783 |
FMG_0625 | rnj | FMG_0625 | FMG_0631 | Conserved hypothetical protein. | Putative Zn-dependent hydrolase; An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and/or decay. | 0.592 |
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