Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
FMG_0664 | FMG_0666 | FMG_0664 | FMG_0666 | Putative rRNA methylase; SUN family; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. | Serine/threonine phosphatases. | 0.951 |
FMG_0664 | FMG_0667 | FMG_0664 | FMG_0667 | Putative rRNA methylase; SUN family; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. | Serine/threonine protein kinase. | 0.779 |
FMG_0664 | FMG_0669 | FMG_0664 | FMG_0669 | Putative rRNA methylase; SUN family; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. | Ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family. | 0.811 |
FMG_0664 | FMG_0670 | FMG_0664 | FMG_0670 | Putative rRNA methylase; SUN family; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. | Conserved hypothetical protein. | 0.645 |
FMG_0664 | FMG_0671 | FMG_0664 | FMG_0671 | Putative rRNA methylase; SUN family; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. | Putative thiamin pyrophosphokinase. | 0.681 |
FMG_0664 | FMG_0740 | FMG_0664 | FMG_0740 | Putative rRNA methylase; SUN family; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. | Putative serine/threonine protein kinase. | 0.450 |
FMG_0664 | FMG_0741 | FMG_0664 | FMG_0741 | Putative rRNA methylase; SUN family; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. | Protein phosphatase. | 0.835 |
FMG_0664 | rlmN | FMG_0664 | FMG_0665 | Putative rRNA methylase; SUN family; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. | Putative Fe-S-cluster redox protein; Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs; Belongs to the radical SAM superfamily. RlmN family. | 0.964 |
FMG_0664 | rsgA | FMG_0664 | FMG_0668 | Putative rRNA methylase; SUN family; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. | Putative GTPase; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit; Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily. | 0.789 |
FMG_0666 | FMG_0664 | FMG_0666 | FMG_0664 | Serine/threonine phosphatases. | Putative rRNA methylase; SUN family; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. | 0.951 |
FMG_0666 | FMG_0667 | FMG_0666 | FMG_0667 | Serine/threonine phosphatases. | Serine/threonine protein kinase. | 0.998 |
FMG_0666 | FMG_0669 | FMG_0666 | FMG_0669 | Serine/threonine phosphatases. | Ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family. | 0.802 |
FMG_0666 | FMG_0670 | FMG_0666 | FMG_0670 | Serine/threonine phosphatases. | Conserved hypothetical protein. | 0.766 |
FMG_0666 | FMG_0671 | FMG_0666 | FMG_0671 | Serine/threonine phosphatases. | Putative thiamin pyrophosphokinase. | 0.787 |
FMG_0666 | FMG_0740 | FMG_0666 | FMG_0740 | Serine/threonine phosphatases. | Putative serine/threonine protein kinase. | 0.989 |
FMG_0666 | FMG_1030 | FMG_0666 | FMG_1030 | Serine/threonine phosphatases. | Conserved hypothetical protein. | 0.508 |
FMG_0666 | rlmN | FMG_0666 | FMG_0665 | Serine/threonine phosphatases. | Putative Fe-S-cluster redox protein; Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs; Belongs to the radical SAM superfamily. RlmN family. | 0.821 |
FMG_0666 | rsgA | FMG_0666 | FMG_0668 | Serine/threonine phosphatases. | Putative GTPase; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit; Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily. | 0.860 |
FMG_0667 | FMG_0664 | FMG_0667 | FMG_0664 | Serine/threonine protein kinase. | Putative rRNA methylase; SUN family; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. | 0.779 |
FMG_0667 | FMG_0666 | FMG_0667 | FMG_0666 | Serine/threonine protein kinase. | Serine/threonine phosphatases. | 0.998 |
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