Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
FMG_0687Conserved hypothetical protein. (213 aa)    
Predicted Functional Partners:
FMG_0688
Hypothetical protein.
       0.710
FMG_0686
Hypothetical protein.
       0.594
FMG_0648
Conserved hypothetical protein.
  
     0.557
FMG_0737
Putative recombinational DNA repair protein; Involved in DNA repair and RecF pathway recombination.
  
     0.504
FMG_0127
Capsular polysaccharide synthesis related protein.
  
     0.478
FMG_0689
Conserved hypothetical protein.
 
     0.461
FMG_1176
Hypothetical protein.
  
     0.456
tmcAL
Conserved hypothetical protein; Catalyzes the formation of N(4)-acetylcytidine (ac(4)C) at the wobble position of elongator tRNA(Met), using acetate and ATP as substrates. First activates an acetate ion to form acetyladenylate (Ac- AMP) and then transfers the acetyl group to tRNA to form ac(4)C34.
       0.433
FMG_0856
Conserved hypothetical protein.
  
     0.407
FMG_0135
Conserved hypothetical protein.
  
     0.406
Your Current Organism:
Finegoldia magna ATCC 29328
NCBI taxonomy Id: 334413
Other names: F. magna ATCC 29328, Finegoldia magna str. ATCC 29328, Finegoldia magna strain ATCC 29328
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