Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
FMG_0698Conserved hypothetical protein. (91 aa)    
Predicted Functional Partners:
recX
Regulatory protein; Modulates RecA activity; Belongs to the RecX family.
       0.814
FMG_1123
Methyltransferase; Belongs to the methyltransferase superfamily.
  
  
 0.682
FMG_0700
Conserved hypothetical protein.
       0.533
FMG_0703
Putative phosphoesterase.
       0.506
FMG_0704
Adenylate cyclase 2.
       0.500
FMG_0701
Putative phosphoesterase.
       0.498
FMG_0702
Putative DNA double-strand break repair rad50 ATPase.
       0.498
topA
Topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoi [...]
       0.466
rpsB
30S ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family.
       0.421
rsmI
Putative methyltransferase; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA.
  
  
 0.408
Your Current Organism:
Finegoldia magna ATCC 29328
NCBI taxonomy Id: 334413
Other names: F. magna ATCC 29328, Finegoldia magna str. ATCC 29328, Finegoldia magna strain ATCC 29328
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