Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| FMG_0385 | leuS | FMG_0385 | FMG_0623 | Pyruvate/ferredoxin oxidoreductase. | leucyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. | 0.860 |
| FMG_0385 | rpoA | FMG_0385 | FMG_0181 | Pyruvate/ferredoxin oxidoreductase. | DNA-directed RNA polymerase alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.447 |
| FMG_0385 | topA | FMG_0385 | FMG_0705 | Pyruvate/ferredoxin oxidoreductase. | Topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoi [...] | 0.974 |
| FMG_0701 | polA | FMG_0701 | FMG_0343 | Putative phosphoesterase. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity. | 0.987 |
| FMG_0701 | rpsB | FMG_0701 | FMG_0706 | Putative phosphoesterase. | 30S ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family. | 0.474 |
| FMG_0701 | topA | FMG_0701 | FMG_0705 | Putative phosphoesterase. | Topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoi [...] | 0.804 |
| FMG_0797 | FMG_1140 | FMG_0797 | FMG_1140 | Putative Smf protein DNA processing subunit A. | Phage-related single-strand DNA-binding protein. | 0.506 |
| FMG_0797 | topA | FMG_0797 | FMG_0705 | Putative Smf protein DNA processing subunit A. | Topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoi [...] | 0.866 |
| FMG_0965 | polA | FMG_0965 | FMG_0343 | Hypothetical protein. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity. | 0.492 |
| FMG_0965 | rpsB | FMG_0965 | FMG_0706 | Hypothetical protein. | 30S ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family. | 0.662 |
| FMG_0965 | topA | FMG_0965 | FMG_0705 | Hypothetical protein. | Topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoi [...] | 0.932 |
| FMG_1140 | FMG_0797 | FMG_1140 | FMG_0797 | Phage-related single-strand DNA-binding protein. | Putative Smf protein DNA processing subunit A. | 0.506 |
| FMG_1140 | polA | FMG_1140 | FMG_0343 | Phage-related single-strand DNA-binding protein. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity. | 0.492 |
| FMG_1140 | rpsB | FMG_1140 | FMG_0706 | Phage-related single-strand DNA-binding protein. | 30S ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family. | 0.662 |
| FMG_1140 | topA | FMG_1140 | FMG_0705 | Phage-related single-strand DNA-binding protein. | Topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoi [...] | 0.932 |
| frr | polA | FMG_0709 | FMG_0343 | Ribosome recycling factor; Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another; Belongs to the RRF family. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity. | 0.548 |
| frr | rpoA | FMG_0709 | FMG_0181 | Ribosome recycling factor; Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another; Belongs to the RRF family. | DNA-directed RNA polymerase alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.736 |
| frr | rpsB | FMG_0709 | FMG_0706 | Ribosome recycling factor; Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another; Belongs to the RRF family. | 30S ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family. | 0.994 |
| frr | topA | FMG_0709 | FMG_0705 | Ribosome recycling factor; Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another; Belongs to the RRF family. | Topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoi [...] | 0.761 |
| leuS | FMG_0385 | FMG_0623 | FMG_0385 | leucyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. | Pyruvate/ferredoxin oxidoreductase. | 0.860 |
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