Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
FMG_0711Late competence protein; DNA binding and uptake. (212 aa)    
Predicted Functional Partners:
FMG_0251
Putative pilin biogenesis protein.
  
  
 0.826
FMG_0555
Type IV pilin PilA homolog.
  
  
 0.823
FMG_0250
Putative ATPases involved in pili biogenesis.
  
  
 0.821
selD
Selenophosphate synthetase; Synthesizes selenophosphate from selenide and ATP.
       0.776
FMG_0713
DNA-binding response regulator.
       0.742
FMG_0788
Putative integral membrane protein.
 
  
 0.737
coaD
Putative phosphopantetheine adenyltransferase; Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. Belongs to the bacterial CoaD family.
      0.717
FMG_1140
Phage-related single-strand DNA-binding protein.
  
  
 0.666
FMG_0714
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
       0.629
tdk
Thymidine kinase.
       0.616
Your Current Organism:
Finegoldia magna ATCC 29328
NCBI taxonomy Id: 334413
Other names: F. magna ATCC 29328, Finegoldia magna str. ATCC 29328, Finegoldia magna strain ATCC 29328
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