Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
FMG_0772Conserved hypothetical protein. (327 aa)    
Predicted Functional Partners:
FMG_0773
Conserved hypothetical protein.
 
  
 0.988
FMG_0771
Conserved hypothetical protein.
       0.773
rpsU
30S ribosomal protein S21; Belongs to the bacterial ribosomal protein bS21 family.
       0.587
nusA
Transcription terminator; Participates in both transcription termination and antitermination.
       0.519
rimP
Conserved hypothetical protein associated with Nus operon; Required for maturation of 30S ribosomal subunits. Belongs to the RimP family.
       0.519
FMG_0768
Conserved hypothetical protein.
       0.471
FMG_0775
HIT family hydrolase.
       0.463
FMG_0763
Riboflavin biosynthesis protein; Belongs to the ribF family.
       0.447
truB
tRNA pseudouridine 5S synthase; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily.
       0.447
FMG_0765
Exopolyphosphatase family proteins.
       0.447
Your Current Organism:
Finegoldia magna ATCC 29328
NCBI taxonomy Id: 334413
Other names: F. magna ATCC 29328, Finegoldia magna str. ATCC 29328, Finegoldia magna strain ATCC 29328
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