Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
FMG_0860Conserved hypothetical protein. (452 aa)    
Predicted Functional Partners:
FMG_0187
Cell wall surface anchor family protein.
  
     0.743
FMG_0127
Capsular polysaccharide synthesis related protein.
  
     0.741
FMG_0186
Hypothetical protein.
  
     0.731
FMG_0916
Conserved hypothetical protein.
  
    0.656
FMG_1550
Conserved hypothetical protein.
  
     0.547
murJ
Putative virulence factor MviN; Involved in peptidoglycan biosynthesis. Transports lipid- linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane.
       0.546
FMG_1604
Transcriptional regulator Crp/Fnr family.
  
    0.520
FMG_1487
N-acetylmuramoyl-L-alanine amidase.
  
     0.517
FMG_1501
Albumin-binding protein like Cwp66.
  
     0.514
FMG_1558
Oligopeptide ABC transporter substrate-binding protein.
  
    0.508
Your Current Organism:
Finegoldia magna ATCC 29328
NCBI taxonomy Id: 334413
Other names: F. magna ATCC 29328, Finegoldia magna str. ATCC 29328, Finegoldia magna strain ATCC 29328
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