Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
FMG_0912Two-component DNA-binding response regulator. (218 aa)    
Predicted Functional Partners:
FMG_0911
Two-component sensor histidine kinase.
 
 
 0.968
FMG_0913
Multidrug ABC transporter permease protein.
 
   
 0.894
FMG_0915
ABC transporter permease protein.
 
   
 0.892
FMG_0914
Multidrug ABC transporter ATP-binding protein.
 
     0.883
FMG_0124
Two-component sensor histidine kinase.
 
   0.809
FMG_1155
NADP-reducing hydrogenase.
   
 
 0.807
FMG_0131
Two-component sensor histidine kinase.
 
 
 0.780
FMG_0910
Conserved hypothetical protein.
       0.769
FMG_0820
Two-component sensor histidine kinase.
 
 
 0.751
FMG_1063
Putative two-component sensor histidine kinase.
 
 
 0.751
Your Current Organism:
Finegoldia magna ATCC 29328
NCBI taxonomy Id: 334413
Other names: F. magna ATCC 29328, Finegoldia magna str. ATCC 29328, Finegoldia magna strain ATCC 29328
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