STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FMG_0932Putative transposon integrase; Belongs to the 'phage' integrase family. (411 aa)    
Predicted Functional Partners:
FMG_0933
Putative transposon excisionase.
 
     0.898
FMG_0222
Putative phage-related protein.
 
  
 0.702
FMG_0943
Conserved hypothetical protein; Rlx-like protein.
 
   
 0.598
FMG_1498
Putative amidophosphoribosyltransferases.
  
    0.580
FMG_0931
methionyl-tRNA synthetase.
 
     0.571
FMG_0891
Conserved hypothetical protein; Belongs to the SOS response-associated peptidase family.
   
    0.545
whiA
Conserved hypothetical protein; Involved in cell division and chromosome segregation.
   
    0.545
apt
Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.
   
    0.542
xpt
Xanthine phosphoribosyltransferase; Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis.
   
    0.542
FMG_0186
Hypothetical protein.
  
  
 0.524
Your Current Organism:
Finegoldia magna ATCC 29328
NCBI taxonomy Id: 334413
Other names: F. magna ATCC 29328, Finegoldia magna str. ATCC 29328, Finegoldia magna strain ATCC 29328
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