STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FMG_0945ABC transporter permease protein. (811 aa)    
Predicted Functional Partners:
FMG_0946
ABC transporter ATP-binding protein.
 
   0.965
FMG_0947
Two-component sensor histidine kinase.
 
    0.913
FMG_0948
Two-component response regulator.
 
     0.896
FMG_1382
Conserved hypothetical protein.
  
     0.746
FMG_0049
Putative N-acetylmuramoyl-L-alanine amidase.
  
     0.705
FMG_1381
Putative esterase.
 
     0.641
FMG_1550
Conserved hypothetical protein.
  
    0.618
FMG_0299
Conserved hypothetical protein.
 
     0.607
FMG_0186
Hypothetical protein.
  
    0.576
FMG_1389
Putative two-component sensor histidine kinase.
 
  
 0.571
Your Current Organism:
Finegoldia magna ATCC 29328
NCBI taxonomy Id: 334413
Other names: F. magna ATCC 29328, Finegoldia magna str. ATCC 29328, Finegoldia magna strain ATCC 29328
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.