STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FMG_0964Conserved hypothetical protein. (71 aa)    
Predicted Functional Partners:
FMG_0960
Conserved hypothetical protein.
 
     0.949
FMG_0963
Conserved hypothetical protein.
 
     0.949
FMG_0965
Hypothetical protein.
    
 0.948
FMG_0961
Conserved hypothetical protein.
 
     0.947
FMG_0959
Putative peptidase.
 
    0.853
FMG_0968
Putative plasmid transfer factor.
 
     0.851
FMG_0982
Putative plasmid transfer factor.
 
     0.783
FMG_0962
Hypothetical protein.
       0.780
FMG_0953
Putative DNA methyltransfarase.
 
   
 0.760
FMG_0957
Putative bacteriocin.
 
     0.601
Your Current Organism:
Finegoldia magna ATCC 29328
NCBI taxonomy Id: 334413
Other names: F. magna ATCC 29328, Finegoldia magna str. ATCC 29328, Finegoldia magna strain ATCC 29328
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.