Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
FMG_0981Site-specific DNA recombinase. (617 aa)    
Predicted Functional Partners:
FMG_0982
Putative plasmid transfer factor.
    0.970
FMG_0983
Putative phage-associated antirepressor.
     
 0.802
FMG_0973
Nickase.
 
   
 0.791
FMG_0975
Hypothetical protein.
  
     0.737
FMG_0970
Conserved hypothetical protein.
  
     0.701
FMG_0972
Putative replisome organizer.
 
     0.688
FMG_0985
DNA replication protein; Phage-related.
       0.670
FMG_0986
Putative replication initiator.
  
    0.658
FMG_0984
Conserved hypothetical protein.
       0.648
FMG_0934
Hypothetical protein.
  
     0.588
Your Current Organism:
Finegoldia magna ATCC 29328
NCBI taxonomy Id: 334413
Other names: F. magna ATCC 29328, Finegoldia magna str. ATCC 29328, Finegoldia magna strain ATCC 29328
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