STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FMG_1005Conserved hypothetical protein; Belongs to the Nudix hydrolase family. (134 aa)    
Predicted Functional Partners:
whiA
Conserved hypothetical protein; Involved in cell division and chromosome segregation.
  
    0.804
FMG_1003
DNA polymerase III alpha subunit; dnaE.
 
   
 0.694
FMG_1001
Pyruvate kinase; Belongs to the pyruvate kinase family.
  
    0.649
pfkA
6-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis.
       0.595
FMG_0999
Putative S4 RNA-binding domain protein.
       0.519
FMG_1006
Conserved hypothetical protein.
       0.516
FMG_1007
Putative tellurite resistance protein; Belongs to the TelA family.
       0.516
FMG_1000
Hydrolase; Haloacid dehalogenase-like family.
       0.507
FMG_0998
Conserved hypothetical protein.
       0.500
FMG_0880
Bifunctional aldolase-pyrophosphokinase; Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin.
     
 0.441
Your Current Organism:
Finegoldia magna ATCC 29328
NCBI taxonomy Id: 334413
Other names: F. magna ATCC 29328, Finegoldia magna str. ATCC 29328, Finegoldia magna strain ATCC 29328
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