Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
FMG_1005Conserved hypothetical protein; Belongs to the Nudix hydrolase family. (134 aa)    
Predicted Functional Partners:
whiA
Conserved hypothetical protein; Involved in cell division and chromosome segregation.
  
    0.808
FMG_1003
DNA polymerase III alpha subunit; dnaE.
 
  
 0.687
FMG_1001
Pyruvate kinase; Belongs to the pyruvate kinase family.
  
    0.654
pfkA
6-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis.
       0.593
FMG_0999
Putative S4 RNA-binding domain protein.
       0.517
FMG_1006
Conserved hypothetical protein.
       0.516
FMG_1007
Putative tellurite resistance protein; Belongs to the TelA family.
       0.516
FMG_1000
Hydrolase; Haloacid dehalogenase-like family.
       0.502
FMG_0998
Conserved hypothetical protein.
       0.500
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity.
     
 0.440
Your Current Organism:
Finegoldia magna ATCC 29328
NCBI taxonomy Id: 334413
Other names: F. magna ATCC 29328, Finegoldia magna str. ATCC 29328, Finegoldia magna strain ATCC 29328
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