Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
atpDV-type sodium ATP synthase subunit D; Produces ATP from ADP in the presence of a proton gradient across the membrane. (214 aa)    
Predicted Functional Partners:
atpB
V-type sodium ATP synthase subunit B; Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type beta chain is a regulatory subunit.
 
 0.999
atpA
V-type sodium ATP synthase subunit A; Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type alpha chain is a catalytic subunit. Belongs to the ATPase alpha/beta chains family.
 
 0.999
atpF
V-type sodium ATP synthase subunit G; Produces ATP from ADP in the presence of a proton gradient across the membrane.
 
 0.999
FMG_1076
V-type sodium ATP synthase subunit C.
 
 0.999
atpE
V-type sodium ATP synthase subunit E; Produces ATP from ADP in the presence of a proton gradient across the membrane.
 
 0.999
FMG_1078
V-type sodium ATP synthase subunit K; Belongs to the V-ATPase proteolipid subunit family.
 
 0.999
FMG_1079
V-type sodium ATP synthase subunit I; Belongs to the V-ATPase 116 kDa subunit family.
 
 0.999
atpB-2
V-type sodium ATP synthase subunit B; Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type beta chain is a regulatory subunit.
 
 0.988
atpA-2
V-type sodium ATP synthase subunit A; Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type alpha chain is a catalytic subunit. Belongs to the ATPase alpha/beta chains family.
 
 0.981
FMG_1167
V-type sodium ATP synthase subunit E.
  
 0.923
Your Current Organism:
Finegoldia magna ATCC 29328
NCBI taxonomy Id: 334413
Other names: F. magna ATCC 29328, Finegoldia magna str. ATCC 29328, Finegoldia magna strain ATCC 29328
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