Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
FMG_1142Conserved hypothetical protein. (229 aa)    
Predicted Functional Partners:
FMG_1143
Biotin synthase.
       0.773
FMG_0836
Putative ADP-ribose pyrophosphatase.
   
 
  0.680
FMG_0467
Trypsin-like serine protease Do; Heat-shock protein.
     
  0.578
rpsF
30S ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA.
       0.496
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
  
  
 0.489
FMG_1140
Phage-related single-strand DNA-binding protein.
       0.463
FMG_0386
Putative acyl-CoA dehydrogenase.
  
 
 0.432
rpsR
30S ribosomal protein S18; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family.
       0.432
FMG_0385
Pyruvate/ferredoxin oxidoreductase.
     
 0.430
FMG_1284
PTS system, fructose-specific enzyme II.
     
 0.426
Your Current Organism:
Finegoldia magna ATCC 29328
NCBI taxonomy Id: 334413
Other names: F. magna ATCC 29328, Finegoldia magna str. ATCC 29328, Finegoldia magna strain ATCC 29328
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