Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
FMG_1146Conserved hypothetical protein. (1401 aa)    
Predicted Functional Partners:
FMG_1613
Conserved hypothetical protein.
 
     0.771
FMG_1199
2-hydroxyglutaryl-CoA dehydratase subunit beta.
  
 
 0.595
FMG_1200
Hypothetical protein.
  
 
 0.595
FMG_1543
Putative 2-hydroxyglutaryl-CoA dehydratase beta subunit.
  
 
 0.595
FMG_1147
Putative Fe-S oxidoreductase.
       0.574
tadA
Putative deaminase; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family.
       0.572
fni
Isopentenyl-diphosphate delta-isomerase; Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP).
       0.556
FMG_1145
Putative transcriptional regulator.
       0.533
FMG_1149
Phosphoribosylpyrophosphate synthetase; Belongs to the ribose-phosphate pyrophosphokinase family.
       0.490
FMG_1201
Activator of 2-hydroxyglutaryl-CoA dehydratase; HSP70-class ATPase domain.
 
   
0.413
Your Current Organism:
Finegoldia magna ATCC 29328
NCBI taxonomy Id: 334413
Other names: F. magna ATCC 29328, Finegoldia magna str. ATCC 29328, Finegoldia magna strain ATCC 29328
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