Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
FMG_1162Oligoendopeptidase F. (578 aa)    
Predicted Functional Partners:
FMG_1159
Antibiotic ABC transporter permease protein.
       0.762
FMG_1160
Antibiotic ABC transporter ATP-binding protein.
       0.762
FMG_1161
Lactoylglutathione lyase.
       0.762
FMG_1163
Conserved hypothetical protein.
       0.553
metK
S-adenosylmethionine synthetase; Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme.
   
   0.503
atpD-2
V-type sodium ATP synthase subunit D; Produces ATP from ADP in the presence of a proton gradient across the membrane.
       0.402
atpB-2
V-type sodium ATP synthase subunit B; Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type beta chain is a regulatory subunit.
       0.402
atpA-2
V-type sodium ATP synthase subunit A; Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type alpha chain is a catalytic subunit. Belongs to the ATPase alpha/beta chains family.
       0.402
FMG_1167
V-type sodium ATP synthase subunit E.
       0.402
FMG_1168
V-type sodium ATP synthase subunit F.
       0.402
Your Current Organism:
Finegoldia magna ATCC 29328
NCBI taxonomy Id: 334413
Other names: F. magna ATCC 29328, Finegoldia magna str. ATCC 29328, Finegoldia magna strain ATCC 29328
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