Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
FMG_1256ABC transporter. (295 aa)    
Predicted Functional Partners:
FMG_1257
Putative low temperature requirement C protein.
  
    0.774
FMG_1255
Hypothetical protein.
       0.773
FMG_1254
Methylated DNA-protein cysteine S-methyltransferase.
       0.668
FMG_1277
Transcriptional regulator GntR family.
  
    0.639
FMG_0241
Putative ABC transporter.
 
  
 0.563
FMG_0495
Conserved hypothetical protein.
  
 
 0.492
FMG_1258
Hypothetical protein.
       0.473
FMG_0240
Antibiotic ABC transporter permease protein.
 
  
 0.470
FMG_1253
Conserved hypothetical protein.
       0.470
Your Current Organism:
Finegoldia magna ATCC 29328
NCBI taxonomy Id: 334413
Other names: F. magna ATCC 29328, Finegoldia magna str. ATCC 29328, Finegoldia magna strain ATCC 29328
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