STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FMG_1264Threonine synthase. (480 aa)    
Predicted Functional Partners:
thrB
Threonine synthase; Catalyzes the ATP-dependent phosphorylation of L-homoserine to L-homoserine phosphate.
 
 
0.982
FMG_0319
Homoserine dehydrogenase.
 
 
 0.939
FMG_1252
Low specificity L-threonine aldolase.
  
 0.930
FMG_0317
Aspartate kinase; Belongs to the aspartokinase family.
 
 
 0.788
FMG_1460
Pyridoxine biosynthesis protein; Belongs to the PdxS/SNZ family.
  
    0.561
FMG_1265
NADH-dependent butanol dehydrogenase.
       0.535
FMG_1263
Multidrug ABC transporter.
       0.475
lysS
lysyl-tRNA synthetase class II; Belongs to the class-II aminoacyl-tRNA synthetase family.
  
 
 0.466
asd
Aspartate-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family.
  
 
 0.464
FMG_1112
Amino acid ABC transporter permease protein.
     
 0.429
Your Current Organism:
Finegoldia magna ATCC 29328
NCBI taxonomy Id: 334413
Other names: F. magna ATCC 29328, Finegoldia magna str. ATCC 29328, Finegoldia magna strain ATCC 29328
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