Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
FMG_1485ABC transporter ATP-binding protein. (233 aa)    
Predicted Functional Partners:
FMG_1484
Putative membrane protein.
       0.803
FMG_1266
Multidrug ABC transporter.
  
   
 0.687
FMG_0134
Putative antibiotic ABC transporter ATP-binding protein.
  
     0.614
FMG_1486
Conserved hypothetical protein.
       0.549
FMG_1159
Antibiotic ABC transporter permease protein.
  
  
 0.445
FMG_1274
Multidrug ABC transporter.
  
     0.443
FMG_1263
Multidrug ABC transporter.
  
     0.438
FMG_1054
ABC transporter ATP-binding protein.
  
     0.419
FMG_1508
Multidrug ABC transporter.
  
     0.400
Your Current Organism:
Finegoldia magna ATCC 29328
NCBI taxonomy Id: 334413
Other names: F. magna ATCC 29328, Finegoldia magna str. ATCC 29328, Finegoldia magna strain ATCC 29328
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