Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
FMG_1524Conserved hypothetical protein. (143 aa)    
Predicted Functional Partners:
FMG_1525
Putative Fe-S oxidoreductase.
       0.714
FMG_1528
Conserved hypothetical protein.
       0.707
FMG_1526
Putative bacterioferritin comigratory protein.
       0.670
FMG_1527
Putative hydrolase.
  
    0.661
FMG_1121
Conserved hypothetical protein.
   
   0.649
FMG_1529
Aminoacyl-histidine dipeptidase.
       0.649
FMG_0861
TPR repeats containing protein.
  
     0.542
FMG_0092
Putative DNA replication protein.
  
     0.540
prfB
Peptide chain release factor B; Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA.
       0.500
FMG_0721
Aspartate carbamoyltransferase regulatory subunit.
  
     0.478
Your Current Organism:
Finegoldia magna ATCC 29328
NCBI taxonomy Id: 334413
Other names: F. magna ATCC 29328, Finegoldia magna str. ATCC 29328, Finegoldia magna strain ATCC 29328
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